| AllContrasts | Constructs a matrix with all the contrasts for pairwise comparisons. | 
| ApproxWaldPvalues | Wald approximation for the p-values of pairwise comparisons based on the design matrix | 
| barplot.PostHoc | Barplot method for objects of class PostHoc | 
| DeIdentifiedExample | A simple example for testing pairwise comparison methods | 
| ExtractCI | Calculates the Wald or a parametric bootstrap confidence intervals for GLMs and GLMMs | 
| FormGroupsClusters | Group effects given the pairwise p-values | 
| GroupClusterEffects | Group effects for GLMs and GLMMs | 
| KruskalWallisAllPvalues | Calculates all p-values of pairwise comparisons using a Kruskal-Wallis test | 
| lines.PostHoc | Lines method for objects of class PostHoc | 
| MedianBootCI | Confidence intervals for medians | 
| plot.PostHoc | Plot method for objects of class PostHoc | 
| posthoc | Group effects for GLMs and GLMMs | 
| posthocKW | Post-hoc analysis based on the Kruskal-Walis test | 
| print.PostHoc | Print methods for objects of class PostHoc | 
| summary.PostHoc | Summary method for objects of class PostHoc | 
| WaldPvalues | Calculates a Wald approximation for the p-values of pairwise comparisons |