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Matrix, stats, utils, graphics, DHARMa, gap, bridgesampling LinkingTo: Rcpp Suggests: DEoptim, lhs, sensitivity, knitr, rmarkdown, roxygen2, testthat License: GPL-3 Archs: i386, x64 Package: Bayesiangammareg Version: 0.1.0 Depends: R (>= 3.1.1), mvtnorm License: GPL (>= 2) Package: Bayesiantreg Version: 1.0 Depends: R (>= 4.1.0) Imports: MASS (>= 7.3), Matrix (>= 1.2), mvtnorm (>= 1.1) License: GPL (>= 2) Package: Bayesrel Version: 0.7.5 Depends: R (>= 2.10) Imports: LaplacesDemon, MASS, lavaan, coda, methods, stats, graphics, Rdpack, Rcpp (>= 1.0.4.6) LinkingTo: Rcpp, RcppArmadillo Suggests: testthat (>= 2.1.0), knitr, rmarkdown License: GPL-3 Archs: i386, x64 Package: BcDiag Version: 1.0.10 Depends: R (>= 2.10) Imports: fabia, methods, graphics, stats Suggests: biclust, isa2 License: GPL-3 Package: Bchron Version: 4.7.6 Depends: R (>= 3.4.0), Imports: utils, MASS, coda, mclust, ggplot2, ggridges, magrittr, purrr, ggforce, dplyr, scales, stringr, checkmate Suggests: knitr, testthat 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GPL-3 Archs: i386, x64 Package: GVARX Version: 1.4 Depends: R (>= 3.5.0),vars,xts Imports: lmtest, lubridate, sandwich, strucchange, tsDyn, urca License: GPL (>= 2) Package: GWASExactHW Version: 1.01 License: GPL-3 Archs: i386, x64 Package: GWASbyCluster Version: 0.1.7 Depends: R (>= 3.5.0), Biobase Imports: stats, snpStats, methods, rootSolve, limma License: GPL (>= 2) Package: GWASinlps Version: 2.2 Depends: mombf Imports: Rcpp (>= 1.0.9), RcppArmadillo, fastglm, horseshoe, survival LinkingTo: Rcpp, RcppArmadillo Suggests: glmnet License: GPL (>= 2) Archs: i386, x64 Package: GWASinspector Version: 1.6.1 Depends: R (>= 3.2) Imports: ini (>= 0.3), futile.logger (>= 1.4), data.table (>= 1.12.8), hash (>= 2.2), tools (>= 3.0), ggplot2 (>= 3.0), knitr (>= 1.1), rmarkdown (>= 0.9), gridExtra, grid, RSQLite, kableExtra (>= 0.8), methods, R.utils, openxlsx (>= 4.0) License: GPL-3 Package: GWEX Version: 1.0.2 Depends: R (>= 2.10) Imports: EnvStats, MASS, mvtnorm, nleqslv, fGarch, parallel, 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tmap, sf Suggests: dplyr, ggplot2, knitr, rmarkdown, scales, viridis License: MIT + file LICENSE Package: bannerCommenter Version: 1.0.0 Suggests: knitr, rmarkdown, dplyr, datasets License: GPL (>= 2) Package: banter Version: 0.9.6 Depends: R (>= 4.1.0), magrittr Imports: dplyr (>= 1.0.6), ggplot2 (>= 3.3.3), gridExtra (>= 2.3), methods, parallel, randomForest (>= 4.6), rfPermute (>= 2.5.1), rlang, stats, swfscMisc (>= 1.5), tibble (>= 3.1.2), tidyr (>= 1.1.1) Suggests: testthat License: GNU General Public License Package: banxicoR Version: 0.9.0 Imports: rvest, stringr, xml2 License: CC0 Package: bapred Version: 1.1 Depends: R (>= 3.1.0), glmnet, lme4, MASS, sva, affyPLM Imports: FNN, fuzzyRankTests, methods, mnormt, affy, Biobase Suggests: ArrayExpress License: GPL-2 Package: barcode Version: 1.3.0 Depends: grid, lattice Enhances: gpairs License: GPL (>= 2) Package: bardr Version: 0.0.9 Depends: R (>= 3.6.0) License: GPL-3 Package: bark Version: 1.0.4 Suggests: BART, e1071, 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R (>= 2.10), tcltk License: GPL (>= 2) Package: bio3d Version: 2.4-4 Depends: R (>= 3.1.0) Imports: Rcpp, parallel, grid, graphics, grDevices, stats, utils LinkingTo: Rcpp Suggests: XML, RCurl, lattice, ncdf4, igraph, bigmemory, knitr, rmarkdown, testthat (>= 0.9.1), httr, msa, Biostrings License: GPL (>= 2) Archs: i386, x64 Package: bioC.logs Version: 1.2.1 Suggests: knitr, devtools, roxygen2, testthat, rmarkdown License: GPL (>= 2) Package: bioOED Version: 0.2.1 Imports: FME (>= 1.3.2), bioinactivation (>= 1.1.2), corrplot(>= 0.73), dplyr (>= 0.5.0), ggplot2 (>= 2.1.0), stats (>= 3.3.2), graphics(>= 3.3.2), MEIGOR (>= 1.0.0), rlang (>= 0.1.6), tidyr (>= 0.7.2), tidyverse(>= 1.2.1), tidyselect(>= 0.2.5) Suggests: knitr (>= 1.9), testthat (>= 0.9.1), rmarkdown (>= 1.12) License: GPL-3 Package: bioPN Version: 1.2.0 License: GPL (>= 2) Archs: i386, x64 Package: bioRad Version: 0.6.2 Depends: R (>= 3.5.0) Imports: assertthat, aws.s3, curl, data.table, fields, ggmap (>= 3.0.0), ggplot2, 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BSD_3_clause + file LICENSE Archs: i386, x64 Package: fdaoutlier Version: 0.2.0 Depends: R (>= 2.10) Imports: MASS Suggests: testthat (>= 2.1.0), covr, spelling, knitr, rmarkdown License: GPL-3 Archs: i386, x64 Package: fdapaceShiny Version: 1.0.5 Imports: config (>= 0.3.1), dplyr, DT, fdapace, ggplot2, golem (>= 0.3.1), htmltools, magrittr, shiny (>= 1.6.0), plotly, purrr, reshape2, stringr, tidyr, bs4Dash, shinyWidgets, shinyjs Suggests: knitr, covr, testthat (>= 3.0.0), rmarkdown License: MIT + file LICENSE Package: fdapace Version: 0.5.9 Imports: Rcpp (>= 0.11.5), Hmisc, MASS, Matrix, pracma, numDeriv LinkingTo: Rcpp, RcppEigen Suggests: plot3D, rgl, aplpack, mgcv, ks, gtools, knitr, rmarkdown, EMCluster, minqa, testthat License: BSD_3_clause + file LICENSE Archs: i386, x64 Package: fdasrvf Version: 2.0.1 Depends: R (>= 4.1.0), Imports: cli, coda, doParallel, fields, foreach, lpSolve, Matrix, mvtnorm, Rcpp, rlang, tolerance, viridisLite LinkingTo: Rcpp, RcppArmadillo Suggests: 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rmarkdown License: GPL (>= 2) Archs: i386, x64 Package: igraphdata Version: 1.0.1 Depends: R (>= 2.10) Suggests: igraph (>= 1.0.0) License: CC BY-SA 4.0 + file LICENSE Package: igraphinshiny Version: 0.1 Depends: R (>= 3.2.0) Imports: shiny, igraph License: GPL (>= 2) Package: igraphtosonia Version: 1.0 Depends: igraph License: GPL (>= 2) Package: igrf Version: 1.0 Depends: R (>= 3.6) Suggests: metR, ggplot2, rnaturalearth, rnaturalearthdata, rmarkdown, covr, testthat, knitr License: AGPL-3 Archs: i386, x64 Package: ihclust Version: 0.1.0 Depends: R (>= 3.5.0) Imports: factoextra, splines, ggplot2, foreach, doParallel, parallel License: GNU General Public License (>= 3) Package: iheiddown Version: 0.9.7 Depends: R (>= 3.5.0) Imports: bookdown, dplyr, ggplot2 (>= 3.4.0), rmarkdown, xaringan, crayon, pdftools, rlang, servr, readr, rstudioapi, tibble, tidytext, bib2df, stringr, fs, usethis, gender, pagedown Suggests: testthat, kableExtra, knitr, DT, leaflet, remotes, modelsummary, gt 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bookdown, jsonlite Suggests: knitr, rmarkdown License: MIT + file LICENSE Package: rollinglda Version: 0.1.2 Depends: R (>= 4.0.0), ldaPrototype (>= 0.3.0) Imports: checkmate (>= 1.8.5), data.table (>= 1.11.2), lubridate, stats, tosca (>= 0.2-0), utils Suggests: covr, testthat License: GPL (>= 3) Archs: i386, x64 Package: rollmatch Version: 2.0.2 Depends: R (>= 3.0.2) Imports: dplyr (>= 0.5.0), magrittr (>= 1.5.0), stats Suggests: testthat (>= 1.0.2) License: MIT + file LICENSE Package: rolocISCCNBS Version: 0.1 Depends: roloc Imports: methods, colorspace License: GPL-2 | GPL-3 Package: roloc Version: 0.1-1 Imports: grDevices, methods, parallel, colorspace Suggests: grid, ggplot2, testthat License: GPL-2 | GPL-3 Package: rolr Version: 1.0.0 Imports: stats, survival Suggests: knitr, rmarkdown, testthat License: GPL-3 Package: romic Version: 1.1.1 Depends: R (>= 3.2.3) Imports: checkmate, dplyr, ggplot2, glue, purrr, readr, reshape2, rlang, shiny (>= 1.5.0), stringr, tibble, tidyr (>= 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(>= 4.3.0) Imports: circlize, cli (>= 3.2.0), cowplot, data.table, dplyr, forcats, ggbeeswarm, ggplot2, ggprism, ggrastr, ggrepel, glue, grDevices, grid, janitor, lifecycle, magrittr, Matrix (>= 1.5.0), methods, paletteer, patchwork, pbapply, purrr, rlang (>= 1.0.1), scales, scattermore (>= 0.7), SeuratObject (>= 4.1.2), stats, stringi, stringr, tibble, tidyr Suggests: ComplexHeatmap, dittoSeq, DropletUtils, ggpubr, hdf5r, knitr, Nebulosa, remotes, rliger, rmarkdown, tidyselect, tidyverse, qs, viridis License: GPL (>= 3) Package: scDHA Version: 1.2.1 Depends: R (>= 3.4) Imports: matrixStats, foreach, doParallel, igraph, Matrix, uwot, cluster, Rcpp, RcppParallel, RcppAnnoy, methods, torch (>= 0.3.0), RhpcBLASctl, coro LinkingTo: Rcpp, RcppArmadillo, RcppParallel, RcppAnnoy Suggests: testthat, knitr, mclust License: GPL-3 Archs: i386, x64 Package: scDIFtest Version: 0.1.1 Imports: sandwich, strucchange, mirt, zoo, Suggests: mvtnorm, psychotree, knitr, rmarkdown, testthat License: GPL-3 Package: scDiffCom Version: 0.1.0 Depends: R (>= 4.0.0) Imports: data.table, DelayedArray, future, future.apply, magrittr, methods, Seurat (>= 4.0.0), stats, utils Suggests: biomaRt, covr, ggplot2, igraph, kableExtra, KEGGREST, knitr, ontologyIndex, ontoProc, pkgdown, RColorBrewer, rmarkdown, spelling, SingleCellSignalR, testthat (>= 3.0.0), visNetwork License: MIT + file LICENSE Package: scINSIGHT Version: 0.1.4 Depends: methods Imports: Rcpp, RANN, igraph, parallel, stats, stringr LinkingTo: Rcpp, RcppArmadillo License: GPL-3 Archs: i386, x64 Package: scISR Version: 0.1.1 Depends: R (>= 3.4) Imports: cluster, entropy, stats, utils, parallel, irlba, PINSPlus, matrixStats, markdown Suggests: testthat, knitr, mclust License: LGPL Package: scITD Version: 1.0.2 Depends: R (>= 4.0.0), Matrix Imports: rTensor, ica, fgsea, circlize, reshape2, parallel, ComplexHeatmap, ggplot2, mgcv, utils, Rcpp, RColorBrewer, dplyr, edgeR, sva, stats, Rmisc, ggpubr, msigdbr, sccore, NMF LinkingTo: Rcpp, RcppArmadillo, RcppProgress Suggests: methods, knitr, rmarkdown, testthat, coda.base, grid, ssvd, simplifyEnrichment, WGCNA, cowplot, matrixStats, stringr, zoo, rlang, AnnotationDbi, GO.db, conos, pagoda2, betareg, slam, tm License: GPL-3 Archs: i386, x64 Package: scLink Version: 1.0.1 Depends: R (>= 3.5.0), parallel, glasso Suggests: knitr, rmarkdown License: GPL-3 Package: scMappR Version: 1.0.10 Depends: R (>= 4.0.0) Imports: ggplot2, pheatmap, graphics, Seurat, GSVA, stats, utils, downloader, pcaMethods, grDevices, gProfileR, limSolve, gprofiler2, pbapply, ADAPTS, reshape, Suggests: testthat, knitr, rmarkdown License: GPL-3 Package: scModels Version: 1.0.4 Depends: R (>= 3.1.0) Imports: Rcpp, gamlss.dist LinkingTo: Rcpp Suggests: knitr, rmarkdown, testthat License: GPL-3 Archs: i386, x64 Package: scOntoMatch Version: 0.1.0 Depends: R(>= 3.5) Imports: ontologyIndex, ontologyPlot, purrr Suggests: knitr, devtools, SeuratObject License: MIT + file LICENSE Package: scPloidy Version: 0.3.0 Depends: R (>= 3.5.0) Imports: dplyr, GenomicRanges, magrittr, matrixStats, mixtools, rlang, Rsamtools, utils Suggests: IRanges, knitr, readr, rmarkdown, testthat (>= 3.0.0) License: MIT + file LICENSE Package: scRNAstat Version: 0.1.1 Depends: R (>= 2.10) Imports: Seurat, ggplot2, stringr, clustree, magrittr, Matrix, dplyr, patchwork License: AGPL (>= 3) Package: scRNAtools Version: 1.0 Depends: R (>= 2.10), foreach, base Imports: ALL, ConsensusClusterPlus, scatterplot3d, ggplot2, Rtsne, limma, edgeR, TPEA, Rmisc, lattice, plyr, ggthemes, reshape2, PerformanceAnalytics, corrplot, Hmisc, igraph, survival Suggests: grid License: GPL-2 Package: scROSHI Version: 1.0.0.0 Depends: R (>= 3.60) Imports: limma, S4Vectors, SingleCellExperiment, stats, SummarizedExperiment, utils, uwot License: MIT + file LICENSE Package: scSorter Version: 0.0.2 Depends: R (>= 3.6.0) Imports: stats (>= 3.6.0) Suggests: knitr, rmarkdown License: GPL-3 Package: scTenifoldKnk Version: 1.0.1 Imports: pbapply, RSpectra, Matrix, methods, stats, utils, MASS, scTenifoldNet Suggests: testthat (>= 2.1.0) License: GPL (>= 2) Package: scTenifoldNet Version: 1.3 Imports: pbapply, RSpectra, Matrix, methods, stats, utils, MASS, RhpcBLASctl Suggests: testthat (>= 2.1.0) License: GPL (>= 2) Package: scUtils Version: 0.1.0 Imports: ggplot2, Matrix, scales, assertthat, dplyr, viridis, viridisLite, methods Suggests: testthat, tibble License: GPL-3 Package: scaRabee Version: 1.1-4 Depends: neldermead (>= 1.0-8), optimsimplex (>= 1.0-5), optimbase (>= 1.0-8) Imports: lattice, grid, deSolve, utils Suggests: knitr (>= 1.28),rmarkdown (>= 2.2) License: GPL-3 Package: sca Version: 0.9-1 Imports: grDevices, graphics, stats Suggests: MASS, Matrix License: GPL (>= 2) Package: scaffolder Version: 0.0.1 Depends: R (>= 3.0) Imports: reticulate, utils Suggests: knitr, rmarkdown, testthat, stringr, tensorflow License: Apache License 2.0 Package: scagnostics Version: 0.2-6 Depends: rJava License: BSD_2_clause + file 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methods, graphics, car, knitr, kableExtra, readxl, mblm, magrittr, yaml Suggests: testthat (>= 3.0.0) License: GPL (>= 3) Package: scanstatistics Version: 1.1.1 Depends: R (>= 3.4) Imports: dplyr, ismev, magrittr, plyr, Rcpp, stats, sets, tibble, tidyr LinkingTo: Rcpp, RcppArmadillo Suggests: purrr, doParallel, foreach, ggplot2, knitr, MASS, pscl, reshape2, rmarkdown, sp, testthat, gamlss.dist License: GPL (>= 3) Archs: i386, x64 Package: scapGNN Version: 0.1.3 Depends: R (>= 4.1.0) Imports: ActivePathways, AdaptGauss, coop, igraph, mixtools, reticulate, methods,compiler Suggests: rmarkdown, knitr License: GPL (>= 2) Package: scape Version: 2.3.3 Imports: stats, utils, coda, Hmisc, lattice Suggests: gdata License: GPL-3 Package: scapesClassification Version: 1.0.0 Depends: R (>= 3.5.0) Imports: terra, methods Suggests: gifski, knitr, leafem, leaflet, leafpop, mapview, raster, spelling, rmarkdown, testthat (>= 3.0.0) License: GPL (>= 3) Package: scar Version: 0.2-2 Depends: R (>= 3.0.0) 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grDevices, graphics, stats License: GPL-2 Package: scbursts Version: 1.6 Imports: readxl, tibble Suggests: knitr, rmarkdown, tinytex License: LGPL-2.1 Package: scclust Version: 0.2.2 Depends: R (>= 3.4.0), distances Suggests: testthat License: GPL (>= 3) Archs: i386, x64 Package: sccore Version: 1.0.3 Depends: R (>= 3.5.0) Imports: dplyr, ggplot2, ggrepel, graphics, grDevices, igraph, irlba, magrittr, Matrix, methods, parallel, pbmcapply, pROC, Rcpp, rlang, scales, stats, tibble, utils, uwot, withr LinkingTo: Rcpp, RcppArmadillo, RcppProgress, RcppEigen Suggests: ggrastr (>= 0.1.7), jsonlite, rmumps, testthat License: GPL-3 Archs: i386, x64 Package: sccr Version: 2.1 Depends: R (>= 3.5.0) Imports: dplyr License: GPL-2 Package: scdensity Version: 1.0.2 Depends: R (>= 3.3.0) Imports: quadprog, lpSolve Suggests: testthat License: GPL-2 Package: scdhlm Version: 0.7.2 Depends: nlme, R (>= 3.0.1) Imports: stats, utils, readxl, rlang, dplyr, tidyselect, magrittr, lmeInfo (>= 0.3.0) Suggests: knitr, markdown, rmarkdown, ggplot2, plyr, boot, parallel, shiny, shinytest, glue, janitor, rclipboard, rvest, testthat License: GPL-3 Package: scellpam Version: 1.4.1 Imports: Rcpp (>= 1.0.8), memuse (>= 4.2.1), cluster (>= 2.1.4) LinkingTo: Rcpp Suggests: rmarkdown, knitr, DuoClustering2018, scater, splatter License: GPL (>= 2) Archs: i386, x64 Package: scenes Version: 0.1.0 Imports: cli, cookies, glue, purrr, rlang, shiny Suggests: covr, knitr, pkgload, rmarkdown, stringr, testthat (>= 3.0.0) License: MIT + file LICENSE Package: scgwr Version: 0.1.2-21 Imports: FNN, spData, sp, dplyr, parallel, optimParallel License: GPL (>= 2) Package: schemr Version: 0.2.0 Imports: dplyr, stringr, magrittr, purrr, apcluster, OpenImageR, methods Suggests: testthat License: GPL-3 Package: schoRsch Version: 1.10 Imports: utils Suggests: ez License: GPL Package: schoenberg Version: 2.0.2 Imports: crayon License: GPL (>= 3) Package: scholar Version: 0.2.4 Depends: R (>= 3.5.0) Imports: R.cache, dplyr, httr, rlang, rvest, stringr, xml2, tidygraph, ggraph, ggplot2 Suggests: knitr, rmarkdown, prettydoc, roxygen2, testthat (>= 2.1.0), spelling License: MIT + file LICENSE Package: schoolmath Version: 0.4.1 Depends: R (>= 2.10) License: GPL (>= 2) Package: schrute Version: 1.0.1 Depends: R (>= 2.10) Imports: magrittr Suggests: dplyr, ggplot2, knitr, rmarkdown, stats, testthat (>= 2.1.0), tidytext License: MIT + file LICENSE Package: schtools Version: 0.4.0 Imports: dplyr, formatR, glue, rlang, stringr, tidyr Suggests: covr, cowplot, ggplot2, ggtext, here, hexSticker, hrbrthemes, knitr, purrr, readr, rmarkdown, showtext, testthat License: MIT + file LICENSE Package: schumaker Version: 1.2.1 Suggests: testthat, knitr, numDeriv, cobs, scam, rbenchmark License: MIT + file LICENSE Package: sciRmdTheme Version: 0.1 Depends: R (>= 3.4) Imports: utils Suggests: rmarkdown, knitr License: MIT + file LICENSE Package: scico Version: 1.3.1 Depends: R (>= 3.5.0) Imports: scales, grDevices Suggests: 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tibble, dplyr, rlang, stats, purrr Suggests: knitr, rmarkdown, testthat (>= 2.1.0) License: MIT + file LICENSE Package: scoper Version: 1.2.1 Depends: R (>= 4.0), ggplot2 (>= 3.3.4) Imports: alakazam (>= 1.2.0), shazam (>= 1.1.0), data.table, doParallel, dplyr (>= 1.0), foreach, methods, Rcpp (>= 0.12.12), rlang, scales, stats, stringi, tidyr (>= 1.0) LinkingTo: Rcpp Suggests: knitr, rmarkdown, testthat License: AGPL-3 Archs: i386, x64 Package: scopr Version: 0.3.4 Depends: R (>= 3.00), behavr Imports: data.table, readr, stringr, RSQLite, memoise, curl Suggests: testthat, covr, knitr, ggetho, zeitgebr License: GPL-3 Package: score Version: 1.0.2 Depends: R (>= 2.10), msm (>= 1.5) License: GNU General Public License (>= 3) Package: scorecardModelUtils Version: 0.0.1.0 Imports: car, e1071, gbm, partykit, randomForest, reshape2, sqldf, stringr, stats, ggplot2, utils License: GPL-2 | GPL-3 Package: scorecard Version: 0.4.1 Depends: R (>= 3.5.0) Imports: data.table (>= 1.10.0), ggplot2, 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1.1-0), zoo (>= 1.7-9), xts (>= 0.8-8), intervals Suggests: adehabitatLT, cshapes (>= 2.0), foreign, gstat (>= 1.0-16), maps, mapdata, plm, raster, RColorBrewer, rmarkdown, RPostgreSQL, knitr, googleVis, ISOcodes, markdown, sf, sftime License: GPL (>= 2) Package: spacyr Version: 1.2.1 Depends: R (>= 3.0.0), methods Imports: data.table, reticulate (>= 1.6) Suggests: dplyr, knitr, quanteda, R.rsp, rmarkdown, spelling, testthat, tidytext, tibble License: GPL-3 Package: spaero Version: 0.6.0 Depends: R (>= 3.2.1) Imports: stats, utils Suggests: covr (>= 3.0.0), earlywarnings (>= 1.0.59), knitr (>= 1.11), moments (>= 0.14), np (>= 0.60.2), pomp (>= 2.1), rmarkdown (>= 0.9.2), testthat (>= 0.11.0) License: GPL (>= 2) | file LICENSE Package: spam64 Version: 2.9-0 Suggests: spam (== 2.9-0) License: LGPL-2 | BSD_3_clause + file LICENSE Archs: i386, x64 Package: spam Version: 2.9-1 Depends: R (>= 3.5) Imports: dotCall64, grid, methods Suggests: spam64, fields, Matrix, testthat, R.rsp, truncdist, knitr, rmarkdown License: LGPL-2 | BSD_3_clause + file LICENSE Archs: i386, x64 Package: spamtree Version: 0.2.2 Imports: Rcpp (>= 1.0.3), FNN, dplyr, magrittr, rlang, tibble LinkingTo: Rcpp, RcppArmadillo Suggests: knitr, rmarkdown, abind, ggplot2 License: GPL-3 Archs: i386, x64 Package: spanish Version: 0.4.2 Imports: magrittr, xml2 Suggests: testthat, tidyr License: GPL-3 Package: spant Version: 2.10.0 Depends: R (>= 2.10) Imports: abind, plyr, pracma, stringr, expm, signal, minpack.lm, utils, graphics, grDevices, smoother, ptw, mmand, RNifti, RNiftyReg, fields, numDeriv, nloptr, irlba, jsonlite Suggests: viridisLite, shiny, miniUI, knitr, rmarkdown, testthat, ragg, doParallel License: GPL-3 Archs: i386, x64 Package: sparcl Version: 1.0.4 License: GPL-2 Archs: i386, x64 Package: spark.sas7bdat Version: 1.4 Imports: sparklyr (>= 0.3) Suggests: knitr, rmarkdown License: GPL-3 Package: sparkavro Version: 0.3.0 Imports: sparklyr, dplyr, DBI Suggests: testthat License: Apache License 2.0 | file LICENSE Package: sparkbq Version: 0.1.1 Depends: R (>= 3.3.2) Imports: sparklyr (>= 0.7.0) Suggests: dplyr License: GPL-3 | file LICENSE Package: sparkhail Version: 0.1.1 Depends: R (>= 3.1.2) Imports: dplyr, sparklyr (>= 1.0.1), sparklyr.nested, utils Suggests: testthat License: Apache License 2.0 | file LICENSE Package: sparkline Version: 2.0 Imports: htmltools, htmlwidgets (>= 0.8) Suggests: formattable, knitr, rmarkdown, shiny License: MIT + file LICENSE Package: sparklyr.flint Version: 0.2.2 Depends: R (>= 3.2) Imports: dbplyr, dplyr, rlang, sparklyr (>= 1.3) Suggests: knitr, rmarkdown, tibble License: Apache License 2.0 Package: sparklyr.nested Version: 0.0.4 Depends: R (>= 3.3) Imports: sparklyr, jsonlite, listviewer, dplyr, rlang, purrr, tidyselect Suggests: testthat, reactR License: Apache License 2.0 | file LICENSE Package: sparklyr Version: 1.8.1 Depends: R (>= 3.2) Imports: assertthat, base64enc, config (>= 0.2), DBI (>= 1.0.0), dbplyr (>= 2.2.1), digest, dplyr (>= 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Package: sparr Version: 2.3-10 Depends: R (>= 2.10.1), spatstat (>= 2.3-0) Imports: spatstat.utils, spatstat.geom, spatstat.explore, spatstat.random, doParallel, parallel, foreach, misc3d Suggests: fftwtools (>= 0.9.8) License: GPL (>= 2) Package: sparrpowR Version: 0.2.7 Depends: R (>= 3.5.0) Imports: doFuture, doRNG, fields, foreach, future, graphics, grDevices, iterators, lifecycle, sparr, spatstat.geom, spatstat.random, stats, terra Suggests: geojsonsf, ggmap, ggplot2, sf, spatstat.data, spelling, testthat, tidyterra, R.rsp License: Apache License (>= 2.0) Package: sparseBC Version: 1.2 Depends: glasso Imports: fields License: GPL (>= 2) Package: sparseDFM Version: 1.0 Depends: R (>= 3.3.0) Imports: Rcpp (>= 1.0.9), Matrix, ggplot2 LinkingTo: Rcpp, RcppArmadillo Suggests: knitr, rmarkdown, gridExtra License: GPL (>= 3) Archs: i386, x64 Package: sparseEigen Version: 0.1.0 Depends: R (>= 3.4.0) Suggests: knitr, MASS, rmarkdown, testthat License: GPL-3 | file LICENSE Package: sparseFLMM Version: 0.4.1 Depends: R (>= 3.3), mgcv (>= 1.8-12), refund (>= 0.1-22) Imports: methods, parallel, MASS, Matrix, data.table License: GPL-2 Package: sparseGAM Version: 1.0 Depends: R (>= 3.6.0) Imports: stats, splines, MASS, pracma, grpreg License: GPL-3 Package: sparseHessianFD Version: 0.3.3.7 Depends: R (>= 4.0.0) Imports: Matrix (>= 1.4), methods, Rcpp (>= 0.12.13) LinkingTo: Rcpp, RcppEigen (>= 0.3.3.3.0) Suggests: testthat, numDeriv, scales, knitr, xtable, dplyr License: MPL (== 2.0) Archs: i386, x64 Package: sparseIndexTracking Version: 0.1.1 Suggests: bookdown, knitr, prettydoc, rmarkdown, R.rsp, xts License: GPL-3 | file LICENSE Package: sparseLDA Version: 0.1-9 Depends: R (>= 2.10) Imports: elasticnet, MASS, mda License: GPL (>= 2) Package: sparseLRMatrix Version: 0.1.0 Depends: Matrix, methods Imports: RSpectra Suggests: covr, testthat (>= 3.0.0) License: MIT + file LICENSE Package: sparseLTSEigen Version: 0.2.0.1 Depends: robustHD (>= 0.4.0) Imports: Rcpp (>= 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2.10) Imports: bdsmatrix, corpcor, dplyr, ggplot2, mvtnorm, rlang Suggests: testthat, MASS, covr, modeldata, spelling License: MIT + file LICENSE Package: sparsegl Version: 1.0.1 Depends: R (>= 3.5) Imports: cli, dotCall64, ggplot2, magrittr, Matrix, methods, rlang, RSpectra, tidyr Suggests: dplyr, glmnet, knitr, markdown, rmarkdown, splines, testthat (>= 3.0.0) License: GPL (>= 2) Archs: i386, x64 Package: sparseinv Version: 0.1.3 Depends: R (>= 3.1) Imports: Matrix, methods, Rcpp, spam LinkingTo: Rcpp Suggests: covr, testthat License: GPL (>= 2.1) Archs: i386, x64 Package: sparsenet Version: 1.4 Depends: Matrix (>= 1.0-6), shape Imports: methods License: GPL-2 Archs: i386, x64 Package: sparsepca Version: 0.1.2 Imports: rsvd License: GPL (>= 3) Package: sparsepp Version: 1.22 Suggests: Rcpp License: BSD_3_clause + file LICENSE Package: sparsereg Version: 1.2 Depends: R (>= 3.0.2), MASS, ggplot2 Imports: Rcpp (>= 0.11.0), msm, VGAM, MCMCpack, coda, glmnet, gridExtra, grid, GIGrvg LinkingTo: Rcpp, RcppArmadillo License: GPL (>= 2) Archs: i386, x64 Package: sparsestep Version: 1.0.1 Depends: R (>= 3.0.0), Matrix (>= 1.0-6) Imports: graphics License: GPL (>= 2) Package: sparsesvd Version: 0.2-2 Depends: R (>= 3.0) Imports: Matrix (>= 1.3), methods License: BSD_3_clause + file LICENSE Archs: i386, x64 Package: sparsevar Version: 0.1.0 Depends: R (>= 3.5.0) Imports: Matrix, ncvreg, parallel, doParallel, glmnet, ggplot2, reshape2, grid, mvtnorm, picasso, corpcor, Suggests: knitr, rmarkdown, testthat, License: GPL-2 Package: sparsevb Version: 0.1.0 Imports: Rcpp (>= 1.0.5), selectiveInference (>= 1.2.5), glmnet (>= 4.0-2), stats LinkingTo: Rcpp, RcppArmadillo, RcppEnsmallen License: GPL (>= 3) Archs: i386, x64 Package: sparsio Version: 1.0.1 Depends: R (>= 3.1.0), methods Imports: Rcpp (>= 0.12.0), Matrix (>= 1.1) LinkingTo: Rcpp Suggests: testthat License: GPL (>= 2) | file LICENSE Archs: i386, x64 Package: sparta Version: 0.8.4 Imports: Rcpp (>= 1.0.5) LinkingTo: Rcpp, RcppArmadillo Suggests: rmarkdown, knitr, tinytest License: MIT + file LICENSE Archs: i386, x64 Package: sparvaride Version: 0.1.0 Depends: R (>= 4.1) Imports: Rcpp LinkingTo: RcppArmadillo, Rcpp Suggests: testthat (>= 3.0.0), knitr, rmarkdown License: GPL (>= 3) Archs: i386, x64 Package: spass Version: 1.3 Imports: Rcpp,mvtnorm,multcomp,MASS,geepack,stats,utils LinkingTo: Rcpp License: GPL Archs: i386, x64 Package: spatPomp Version: 0.31.0.0 Depends: pomp (>= 4.5.2), R(>= 4.1), methods Imports: foreach, dplyr, tidyr, stringr, abind, rlang, magrittr, ggplot2 LinkingTo: pomp Suggests: testthat, doParallel (>= 1.0.11), parallel, doRNG License: GPL-3 Archs: i386, x64 Package: spate Version: 1.7.4 Depends: R (>= 2.10), mvtnorm, truncnorm License: GPL-2 Archs: i386, x64 Package: spatgeom Version: 0.2.0 Depends: R (>= 3.6.0) Imports: ggplot2, scales, sf, dplyr, lwgeom, cowplot, purrr Suggests: rmarkdown, knitr, testthat (>= 2.1.0) License: MIT + file LICENSE Package: spatgraphs Version: 3.4 Imports: Rcpp (>= 0.11.6), Matrix, methods LinkingTo: Rcpp Suggests: rgl License: GPL (>= 2) Archs: i386, x64 Package: spathial Version: 0.1.2 Depends: R (>= 3.5) Imports: pracma, igraph, matrixStats, MASS, Rtsne, class, utils, knitr, rmarkdown, irlba License: GPL-3 Package: spatialCovariance Version: 0.6-9 License: GPL Package: spatialEco Version: 2.0-0 Depends: R (>= 4.0) Imports: sf, terra, spatstat.geom (>= 3.0-3), spatstat.explore, spdep, ks, cluster, readr, RCurl, RANN, rms, yaImpute, mgcv, EnvStats, SpatialPack (>= 0.3), MASS Suggests: gstat, spatstat.data, methods, RStoolbox, units, sp, raster, stringr License: GPL-3 Package: spatialRF Version: 1.1.4 Depends: R (>= 2.10) Imports: dplyr, ggplot2, magrittr, stats, tibble, utils, foreach, doParallel, ranger, rlang, tidyr, tidyselect, huxtable, patchwork, viridis Suggests: testthat, spelling License: GPL-3 Package: spatialTIME Version: 1.3.3-3 Depends: R (>= 2.10) Imports: magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr, rlang, plyr, spatstat.geom, spatstat.explore, RColorBrewer, furrr, future, tidyselect, crayon Suggests: knitr, rmarkdown, testthat (>= 3.0.0), gridExtra, pheatmap License: MIT + file LICENSE Package: spatial Version: 7.3-16 Priority: recommended Depends: R (>= 3.0.0), graphics, stats, utils Suggests: MASS License: GPL-2 | GPL-3 Archs: i386, x64 Package: spatialfusion Version: 0.6-6 Depends: R (>= 3.4.0), Rcpp Imports: methods, graphics, stats, utils, rstan, sp, fields, rgeos, spam, deldir Suggests: INLA, testthat, tmap, R.rsp License: GPL (>= 3) Package: spatialprobit Version: 1.0 Depends: R (>= 1.9.0), Matrix, spdep (>= 1.1-1), spatialreg (>= 1.1-1), mvtnorm, tmvtnorm Imports: stats Suggests: RUnit, testthat License: GPL (>= 2) Package: spatialreg Version: 1.2-8 Depends: R (>= 3.3.0), spData, Matrix, sf Imports: spdep, expm, coda, methods, MASS, boot, splines, LearnBayes, nlme Suggests: parallel, RSpectra, tmap, foreign, spam, knitr, lmtest, sandwich, rmarkdown, igraph, tinytest License: GPL-2 Archs: i386, x64 Package: spatialrisk Version: 0.7.0 Depends: R (>= 3.3) Imports: classInt, colourvalues, data.table, dplyr, fs, GenSA, geohashTools, ggplot2, leafem, leafgl, leaflet, lubridate, methods, Rcpp, RcppProgress, sf, tmap, units, viridis LinkingTo: Rcpp, RcppProgress Suggests: automap, gstat, knitr, mgcv, rmarkdown, testthat, vroom License: GPL (>= 2) Archs: i386, x64 Package: spatialsample Version: 0.3.0 Depends: R (>= 3.4) Imports: dplyr (>= 1.0.0), ggplot2, glue, purrr, rlang (>= 1.0.0), rsample (>= 1.1.1), sf (>= 1.0-9), tibble, tidyselect, units, vctrs (>= 0.3.6) LinkingTo: cpp11 Suggests: covr, gifski, knitr, lwgeom, modeldata, rmarkdown, testthat (>= 3.0.0), tidyr, vdiffr, whisker, withr, yardstick License: MIT + file LICENSE Archs: i386, x64 Package: spatialwarnings Version: 3.0.3 Depends: R (>= 3.3.0), future Imports: Rcpp, ggplot2, plyr, stats, utils, future.apply, gsl, segmented LinkingTo: Rcpp, RcppArmadillo Suggests: moments, poweRlaw, reshape2, testthat, covr, acss, mgcv, gstat, sp, raster License: MIT + file LICENSE Archs: i386, x64 Package: spatialwidget Version: 0.2.3 Depends: R (>= 3.3.0) Imports: Rcpp LinkingTo: BH, colourvalues (>= 0.3.4), geojsonsf (>= 1.3.3), geometries, jsonify (>= 1.1.1), rapidjsonr, Rcpp, sfheaders (>= 0.2.1) Suggests: colourvalues, covr, geojsonsf, jsonify, sfheaders, knitr, rmarkdown, testthat License: GPL-3 Archs: i386, x64 Package: spatsoc Version: 0.1.16 Depends: R (>= 3.4) Imports: data.table (>= 1.10.5), sp, rgeos, adehabitatHR, igraph, methods Suggests: testthat (>= 2.1.0), knitr, rmarkdown, asnipe, markdown License: GPL-3 | file LICENSE Package: spatstat.Knet Version: 3.0-2 Depends: R (>= 3.5.0), spatstat.data (>= 3.0), spatstat.sparse (>= 3.0), spatstat.geom (>= 3.0), spatstat.random (>= 3.0), spatstat.explore, spatstat.model, spatstat.linnet (>= 3.0), spatstat (>= 3.0) Imports: spatstat.utils (>= 3.0), Matrix License: GPL (>= 2) Archs: i386, x64 Package: spatstat.data 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License: GPL (>= 2) Package: spiralize Version: 1.0.6 Depends: R (>= 3.6.0), grid Imports: GlobalOptions (>= 0.1.1), GetoptLong (>= 0.1.8), circlize, stats, methods, grDevices, lubridate, utils Suggests: ComplexHeatmap, knitr, rmarkdown, grImport, grImport2, jpeg, png, tiff, ape, cranlogs, cowplot, dendextend, bezier, magick License: MIT + file LICENSE Package: spiritR Version: 0.1.1 Imports: xml2, httr, magrittr Suggests: testthat, knitr, rmarkdown, pkgdown, covr License: MIT + file LICENSE Package: spiro Version: 0.1.2 Imports: ggplot2, xml2, readxl, knitr, cowplot, digest, signal Suggests: testthat (>= 3.0.0), rmarkdown, ggborderline License: MIT + file LICENSE Package: splancs Version: 2.01-43 Depends: R (>= 2.10.0), sp (>= 0.9) Imports: stats, graphics, grDevices, methods License: GPL (>= 2) Archs: i386, x64 Package: splash Version: 1.0.2 Depends: R (>= 3.2.3) License: GPL-3 Package: spldv Version: 0.1.1 Depends: R (>= 4.0) Imports: Formula, Matrix, maxLik, stats, sphet, memisc, 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License Package: startR Version: 2.2.2 Depends: R (>= 3.6.0) Imports: abind, bigmemory, future, multiApply (>= 2.1.0), parallel, easyNCDF, s2dv, ClimProjDiags, PCICt, methods Suggests: stats, utils, testthat License: GPL-3 Package: starter Version: 0.1.13 Depends: R (>= 3.4) Imports: dplyr (>= 1.1.0), cli (>= 3.6.0), gert (>= 1.9.2), glue (>= 1.6.2), here (>= 1.0.1), R.utils (>= 2.11.0), renv (>= 0.17.2), rlang (>= 1.0.6), rstudioapi Suggests: covr (>= 3.5.1), fs (>= 1.5.0), knitr (>= 1.34), pkgdown (>= 1.6.1), readr (>= 2.0.1), rmarkdown (>= 2.11), spelling (>= 2.2), testthat (>= 3.0.4) License: AGPL (>= 3) Package: starticles Version: 0.1.0 Depends: R (> 3.5.0) Imports: rmarkdown, bookdown, knitr Suggests: rticles License: GPL-3 Package: startup Version: 0.20.0 Depends: R (>= 2.14.0) Suggests: commonmark, tools, tcltk License: LGPL (>= 2.1) Package: startupmsg Version: 0.9.6 Depends: R(>= 1.8.0) License: LGPL-3 Package: starvars Version: 1.1.10 Depends: R (>= 4.0) Imports: MASS, ks, 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